2002-2009 Publications

2009 Publications

• Grid-based cancer growth simulations: https://www.researchgate.net/publication/274732408_Grid-based_cancer_growth_simulations
• P2SI2-ImmunoGrid services integration: a working example of web based approach: https://www.researchgate.net/publication/274732563_P2SI2-ImmunoGrid_services_integration_a_working_example_of_web_based_approach
• A biological optimization problem on the Grid: https://www.researchgate.net/publication/274732500_A_biological_optimization_problem_on_the_Grid
• HAMFAST: Fast Hamming Distance Computation: https://ieeexplore.ieee.org/document/5171235
• Toward Multi-organs Simulations of Immune-Pathogen Interactions: https://ieeexplore.ieee.org/document/5364850
• Agent Based Modeling of Lung Metastasis-Immune System Competition: https://link.springer.com/chapter/10.1007/978-3-642-03246-2_1
• Agent Based Modeling of Atherosclerosis: A Concrete Help in Personalized Treatments: https://link.springer.com/chapter/10.1007/978-3-642-04020-7_41
• Searching of optimal vaccination schedules: https://ieeexplore.ieee.org/document/5165227
• SIMULATED ANNEALING AND OPTIMAL PROTOCOLS: https://www.worldscientific.com/doi/abs/10.1142/S0218126609005770
• ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization: https://academic.oup.com/bib/article/10/3/330/211831
• Effect of LDL-apheresis on plasma lipids, chitotriosidase and anti-oxLDL antibodies in heterozygous familial hypercholes-terolemia: https://www.scirp.org/journal/paperinformation?paperid=835
• The MWF method for kinetic equations system: https://www.sciencedirect.com/science/article/pii/S0898122108004756?via%3Dihub

2008 Publications

• Translational Immunomics of Cancer Immunoprevention: https://www.researchgate.net/publication/274732455_Translational_Immunomics_of_Cancer_Immunoprevention
• Predictive Models in Tumor Immunology: https://link.springer.com/chapter/10.1007/978-0-8176-4713-1_14
• Modelling Vaccine Protocols: https://link.springer.com/chapter/10.1007/978-3-7643-8591-0_10
• Optimal vaccination schedules using simulated annealing: https://academic.oup.com/bioinformatics/article/24/15/1740/264927
• Computational Simulations of the Immune System for Personalized Medicine: State of the Art and Challenges: https://www.eurekaselect.com/article/40140
• Modeling immune system control of atherogenesis: https://academic.oup.com/bioinformatics/article/24/15/1715/265603

2007 Publications

• Tumor associated antigen variation – in silico experiments using the Sicilian Grid: https://www.researchgate.net/publication/274732622_Tumor_associated_antigen_variation_-_in_silico_experiments_using_the_Sicilian_Grid
• A Genetic Algorithm for Shortest Path Motion Problem in Three Dimensions: https://link.springer.com/chapter/10.1007/978-3-540-74205-0_58
• Towards a Personalized Schedule with Triplex Vaccine: https://link.springer.com/chapter/10.1007/978-3-540-73400-0_79
• Optimization of HAART with genetic algorithms and agent-based models of HIV infection: https://academic.oup.com/bioinformatics/article/23/24/3350/2748126

2006 Publications

• THE STABILIZATION EFFECT OF THE TRIPLEX VACCINE: https://www.worldscientific.com/doi/abs/10.1142/9789812774118_0083
• Genetic Algorithm Against Cancer: https://link.springer.com/chapter/10.1007/11676935_27
• Model Deconstruction of an Immunoprevention Vaccine: https://link.springer.com/chapter/10.1007/11881223_43
• Analysis of vaccine’s schedules using models: https://www.sciencedirect.com/science/article/abs/pii/S0008874907000561?via%3Dihub
• MODELING TUMOR IMMUNOLOGY: https://www.worldscientific.com/doi/abs/10.1142/S0218202506001479
• Discovery of cancer vaccination protocols with a genetic algorithm driving an agent based simulator: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-7-352

2005 Publications

• Using Viruses to Improve GAs: https://link.springer.com/chapter/10.1007/11539902_19
• MATHS AGAINST CANCER: https://www.worldscientific.com/doi/abs/10.1142/9789812835635_0129
• Modelling vaccination schedules for a cancer immunoprevention vaccine: https://www.neueve.com/blogs/immunome-research/1-1-5
• Modeling and simulation of cancer immunoprevention vaccine: https://academic.oup.com/bioinformatics/article/21/12/2891/268025

2004 Publications

• MT-FWL: Multi-Target Firewall Language: https://www.researchgate.net/publication/274732590_MT-FWL_Multi-Target_Firewall_Language

2003 Publications

• The Hitting Set Problem and Evolutionary Algorithmic Techniques with ad-hoc Viruses (HEAT-V): https://link.springer.com/chapter/10.1007/3-540-45110-2_29
• An ant-algorithm for the weighted minimum hitting set problem: https://ieeexplore.ieee.org/document/1202239

2002 Publications

• An evolutionary algorithm for the T-constrained variation of Minimum Hitting Set problem: https://ieeexplore.ieee.org/document/1006262